The 13 common GO terms of the PCTFP (Msn2-Crz1)

GO ID GO Level GO Term GO Aspect GO Term Definition
GO:0005737 4 cytoplasm C All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0043565 6 sequence-specific DNA binding F Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
GO:0071483 7 cellular response to blue light P Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a blue light stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.
GO:0005634 5 nucleus C A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0061404 8 positive regulation of transcription from RNA polymerase II promoter in response to increased salt P Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
GO:0006355 6 regulation of transcription, DNA-templated P Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0061422 7 positive regulation of transcription from RNA polymerase II promoter in response to alkaline pH P Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a pH >7.0.
GO:0045944 7 positive regulation of transcription from RNA polymerase II promoter P Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
GO:0006351 6 transcription, DNA-templated P The cellular synthesis of RNA on a template of DNA.
GO:0003676 4 nucleic acid binding F Interacting selectively and non-covalently with any nucleic acid.
GO:0003677 5 DNA binding F Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0000987 9 core promoter proximal region sequence-specific DNA binding F Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to the core promoter. The transcribed region might be described as a gene, cistron, or operon.
GO:0046872 5 metal ion binding F Interacting selectively and non-covalently with any metal ion.