The 53 papers which experimentally study the biological roles of both TFs of the PCTFP (Mig1-Cat8)
Bourges I, et al. (2009) Multiple defects in the respiratory chain lead to the repression of genes encoding components of the respiratory chain and TCA cycle enzymes. J Mol Biol 387(5):1081-91
Zaragoza O, et al. (2001) Regulatory elements in the FBP1 promoter respond differently to glucose-dependent signals in Saccharomyces cerevisiae. Biochem J 359(Pt 1):193-201
Zheng J, et al. (2010) Epistatic relationships reveal the functional organization of yeast transcription factors. Mol Syst Biol 6():420
Schuller HJ (2003) Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiae. Curr Genet 43(3):139-60
Proft M, et al. (1995) CAT5, a new gene necessary for derepression of gluconeogenic enzymes in Saccharomyces cerevisiae. EMBO J 14(24):6116-26
Lorenz DR, et al. (2009) A network biology approach to aging in yeast. Proc Natl Acad Sci U S A 106(4):1145-50
Bergdahl B, et al. (2013) Engineering yeast hexokinase 2 for improved tolerance toward xylose-induced inactivation. PLoS One 8(9):e75055
Kayikci O and Nielsen J (2015) Glucose repression in Saccharomyces cerevisiae. FEMS Yeast Res 15(6)
Weinhandl K, et al. (2014) Carbon source dependent promoters in yeasts. Microb Cell Fact 13(1):5
Wuster A and Babu MM (2010) Transcriptional control of the quorum sensing response in yeast. Mol Biosyst 6(1):124-31
Carlson M (1999) Glucose repression in yeast. Curr Opin Microbiol 2(2):202-7
Engelberg D, et al. (2014) Transmembrane signaling in Saccharomyces cerevisiae as a model for signaling in metazoans: state of the art after 25 years. Cell Signal 26(12):2865-78
Schuurmans JM, et al. (2008) Physiological and transcriptional characterization of Saccharomyces cerevisiae strains with modified expression of catabolic regulators. FEMS Yeast Res 8(1):26-34
Ramirez MA and Lorenz MC (2009) The transcription factor homolog CTF1 regulates {beta}-oxidation in Candida albicans. Eukaryot Cell 8(10):1604-14
Bonander N, et al. (2008) Transcriptome analysis of a respiratory Saccharomycescerevisiae strain suggests the expression of its phenotype is glucose insensitive and predominantly controlled by Hap4, Cat8 and Mig1. BMC Genomics 9:365
Gordan R, et al. (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Bussereau F, et al. (2006) The Kluyveromyces lactis repertoire of transcriptional regulators. FEMS Yeast Res 6(3):325-35
Rodkaer SV and Faergeman NJ (2014) Glucose- and nitrogen sensing and regulatory mechanisms in Saccharomyces cerevisiae. FEMS Yeast Res 14(5):683-96
Lodi T, et al. (2002) Co-ordinate regulation of lactate metabolism genes in yeast: the role of the lactate permease gene JEN1. Mol Genet Genomics 266(5):838-47
Beskow A and Wright AP (2006) Comparative analysis of regulatory transcription factors in Schizosaccharomyces pombe and budding yeasts. Yeast 23(13):929-35
Busti S, et al. (2010) Glucose signaling-mediated coordination of cell growth and cell cycle in Saccharomyces cerevisiae. Sensors (Basel) 10(6):6195-240
Salusjarvi L, et al. (2008) Regulation of xylose metabolism in recombinant Saccharomyces cerevisiae. Microb Cell Fact 7:18
Hedges D, et al. (1995) CAT8, a new zinc cluster-encoding gene necessary for derepression of gluconeogenic enzymes in the yeast Saccharomyces cerevisiae. Mol Cell Biol 15(4):1915-22
Chang YW, et al. (2008) Roles of cis- and trans-changes in the regulatory evolution of genes in the gluconeogenic pathway in yeast. Mol Biol Evol 25(9):1863-75
Dos Santos SC, et al. (2009) Transcriptomic profiling of the Saccharomyces cerevisiae response to quinine reveals a glucose limitation response attributable to drug-induced inhibition of glucose uptake. Antimicrob Agents Chemother 53(12):5213-23
Middendorf M, et al. (2004) Predicting genetic regulatory response using classification. Bioinformatics 20 Suppl 1():i232-40
Zhao Y, et al. (2008) Development of a Novel Oligonucleotide Array-Based Transcription Factor Assay Platform for Genome-Wide Active Transcription Factor Profiling in Saccharomyces cerevisiae. J Proteome Res 7(3):1315-1325
Jothi R, et al. (2009) Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture. Mol Syst Biol 5:294
Alberghina L, et al. (2011) Cell growth and cell cycle in Saccharomyces cerevisiae: basic regulatory design and protein-protein interaction network. Biotechnol Adv 30(1):52-72
Rahner A, et al. (1996) Dual influence of the yeast Cat1p (Snf1p) protein kinase on carbon source-dependent transcriptional activation of gluconeogenic genes by the regulatory gene CAT8. Nucleic Acids Res 24(12):2331-7
Perez-Sampietro M, et al. (2013) The AMPK family member Snf1 protects Saccharomyces cerevisiae cells upon glutathione oxidation. PLoS One 8(3):e58283
Usaite R, et al. (2006) Global transcriptional and physiological responses of Saccharomyces cerevisiae to ammonium, L-alanine, or L-glutamine limitation. Appl Environ Microbiol 72(9):6194-203
Yu H and Gerstein M (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Balazsi G (2010) Network reconstruction reveals new links between aging and calorie restriction in yeast. HFSP J 4(3-4):94-9
Umemura K, et al. (1997) Derepression of gene expression mediated by the 5' upstream region of the isocitrate lyase gene of Candida tropicalis is controlled by two distinct regulatory pathways in Saccharomyces cerevisiae. Eur J Biochem 243(3):748-52
Duenas-Sanchez R, et al. (2012) Transcriptional regulation of fermentative and respiratory metabolism in Saccharomyces cerevisiae industrial bakers' strains. FEMS Yeast Res 12(6):625-36
Randez-Gil F, et al. (1997) Glucose derepression of gluconeogenic enzymes in Saccharomyces cerevisiae correlates with phosphorylation of the gene activator Cat8p. Mol Cell Biol 17(5):2502-10
Zhang YQ and Rao R (2007) Global disruption of cell cycle progression and nutrient response by the antifungal agent amiodarone. J Biol Chem 282(52):37844-53
Bojunga N and Entian KD (1999) Cat8p, the activator of gluconeogenic genes in Saccharomyces cerevisiae, regulates carbon source-dependent expression of NADP-dependent cytosolic isocitrate dehydrogenase (Idp2p) and lactate permease (Jen1p). Mol Gen Genet 2
Kitagaki H, et al. (2009) ISC1-dependent Metabolic Adaptation Reveals an Indispensable Role for Mitochondria in Induction of Nuclear Genes during the Diauxic Shift in Saccharomyces cerevisiae. J Biol Chem 284(16):10818-30
Han BK and Emr SD (2013) The Phosphatidylinositol 3,5-Bisphosphate (PI(3,5)P2)-dependent Tup1 Conversion (PIPTC) Regulates Metabolic Reprogramming from Glycolysis to Gluconeogenesis. J Biol Chem 288(28):20633-45
Bergen AC, et al. (2016) Divergent MLS1 promoters lie on a fitness plateau for gene expression. Mol Biol Evol ()
Babbitt GA (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Ghillebert R, et al. (2011) The AMPK/SNF1/SnRK1 fuel gauge and energy regulator: structure, function and regulation. FEBS J 278(21):3978-90
Lavoie H, et al. (2009) Rearrangements of the transcriptional regulatory networks of metabolic pathways in fungi. Curr Opin Microbiol 12(6):655-63
Broach JR (2012) Nutritional control of growth and development in yeast. Genetics 192(1):73-105
Conrad M, et al. (2014) Nutrient sensing and signaling in the yeast Saccharomyces cerevisiae. FEMS Microbiol Rev 38(2):254-99
Casal M, et al. (2016) Carboxylic Acids Plasma Membrane Transporters in Saccharomyces cerevisiae. Adv Exp Med Biol 892():229-51
Galdieri L, et al. (2014) Protein acetylation and acetyl coenzyme a metabolism in budding yeast. Eukaryot Cell 13(12):1472-83
Ronen M and Botstein D (2006) Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source. Proc Natl Acad Sci U S A 103(2):389-94
Ratnakumar S, et al. (2011) Phenomic and transcriptomic analyses reveal that autophagy plays a major role in desiccation tolerance in Saccharomyces cerevisiae. Mol Biosyst 7(1):139-49
Gelade R, et al. (2003) Multi-level response of the yeast genome to glucose. Genome Biol 4(11):233
Velazquez-Arellano A, et al. (2011) A heuristic model for paradoxical effects of biotin starvation on carbon metabolism genes in the presence of abundant glucose. Mol Genet Metab 102(1):69-77